Test Code LAB2003 Cystic Fibrosis, CFTR Gene, Variant Panel, Varies
Additional Codes
CFMP
Ordering Guidance
If testing is negative, and a diagnosis of cystic fibrosis is still suspected, consider CFTRZ / CFTR Gene, Full Gene Analysis, Varies.
Targeted testing for familial variants (also called site-specific or known mutation testing) is available for all genes on this panel under FMTT / Familial Variant, Targeted Testing, Varies. Call 800-533-1710 to obtain more information about this testing option.
Shipping Instructions
Specimen preferred to arrive within 96 hours of collection.
Necessary Information
If there is a family history of cystic fibrosis, the known variant in the family should be supplied for best interpretation of results.
Specimen Required
Specimen Type: Whole blood
Patient Preparation: A previous bone marrow transplant from an allogenic donor will interfere with testing. Call 800-533-1710 for instructions for testing patients who have received a bone marrow transplant.
Container/Tube:
Preferred: Lavender top (EDTA) or yellow top (ACD)
Acceptable: Any anticoagulant
Specimen Volume: 3 mL
Collection Instructions:
1. Invert several times to mix blood.
2. Send whole blood specimen in original tube. Do not aliquot.
Additional Information: To ensure minimum volume and concentration of DNA is met, the preferred volume of blood must be submitted. Testing may be canceled if DNA requirements are inadequate.
Forms
1. New York Clients-Informed consent is required. Document on the request form or electronic order that a copy is on file. The following documents are available:
-Informed Consent for Genetic Testing (T576)
-Informed Consent for Genetic Testing-Spanish (T826)
2. Molecular Genetics: Congenital Inherited Diseases Patient Information (T521)
Secondary ID
605197Useful For
Confirmation of a clinical diagnosis of cystic fibrosis
Reproductive risk refinement via carrier screening for individuals in the general population
Reproductive risk refinement via carrier screening for individuals with a family history when familial variants are not available
Identification of patients who may respond to cystic fibrosis transmembrane conductance regulator (CFTR) potentiator therapy
Special Instructions
Method Name
Targeted Genotyping Array
Specimen Type
VariesSpecimen Minimum Volume
1 mL
Specimen Stability Information
Specimen Type | Temperature | Time | Special Container |
---|---|---|---|
Varies | Ambient (preferred) | ||
Frozen | |||
Refrigerated |
Reject Due To
All specimens will be evaluated at Mayo Clinic Laboratories for test suitability.Reference Values
An interpretive report will be provided.
Interpretation
All reported alterations are evaluated according to American College of Medical Genetics and Genomics recommendations.(1) Variants are classified based on known, predicted, or possible pathogenicity and reported with interpretive comments detailing their potential or known significance.
Method Description
The targeted genotyping assay utilizing the ThermoFisher GeneTitan platform is used to detect 500 plus genetic targets, including the 23 disease-causing variants specified in the American College of Medical Genetics standards for population-based carrier screening. For details regarding the targeted disease-causing variants identified by this test see Targeted Variants Interrogated by Cystic Fibrosis Variant Panel. Confirmatory testing of homozygous results is performed as reflex tests when appropriate.
Multiplex ligation-dependent probe amplification, polymerase chain reaction (PCR), relative quantitative PCR, and Sanger sequencing are used to confirm alterations detected by array when appropriate.(Unpublished Mayo method)
Day(s) Performed
Monday, Wednesday, Friday
Report Available
7 to 21 daysSpecimen Retention Time
Whole Blood: 2 weeks (if available); Extracted DNA: 3 monthsPerforming Laboratory
Mayo Clinic Laboratories in RochesterCPT Code Information
81220
81222
LOINC Code Information
Test ID | Test Order Name | Order LOINC Value |
---|---|---|
CFMP | Cystic Fibrosis (CF) Mutation Panel | 38404-0 |
Result ID | Test Result Name | Result LOINC Value |
---|---|---|
606027 | Result Summary | 50397-9 |
606028 | Result | 82939-0 |
606029 | Interpretation | 69047-9 |
606030 | Additional Information | 48767-8 |
606031 | Method | 85069-3 |
606032 | Specimen | 31208-2 |
606033 | Source | 31208-2 |
606034 | Released By | 18771-6 |
Testing Algorithm
See Cystic Fibrosis Molecular Diagnostic Testing Algorithm for additional information.